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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs34098102 chr2:29247800 T/C 0.000141 405 14.57 20.97 4.15 KM Plot
LGG rs34159706 chr10:1069190 C/T 4.45E-5 400 15.95 14.77 10.57 KM Plot
LGG rs34205992 chr10:64005582 T/TA 0.000142 402 12.17 15.57 15.78 KM Plot
LGG rs34270014 chr10:904666 T/C 2.66E-6 405 15.13 17.73 10.57 KM Plot
LGG rs34279159 chr2:25307207 G/A 0.000117 402 15.2 15.33 4.68 KM Plot
LGG rs34284130 chr10:946244 A/G 3.68E-5 405 14.75 17.73 12.17 KM Plot
LGG rs34487581 chr10:897201 G/A 1.17E-5 403 15.2 17.4 10.57 KM Plot
LGG rs34527494 chr10:935192 T/C 1.22E-5 401 15.2 15.73 12.17 KM Plot
LGG rs34545155 chr5:93936476 C/CA 4.45E-5 404 14.78 17.73 9.8 KM Plot
LGG rs34691909 chr5:156049550 AT/A 0.000234 393 16.9 14.43 11.17 KM Plot
LGG rs34751155 chr10:882007 GT/G 2.36E-5 405 15.13 17.73 12.17 KM Plot
LGG rs34818780 chr5:94022904 G/C 4.06E-5 397 14.87 17.53 14.53 KM Plot
LGG rs34847097 chr10:902252 A/T 2.66E-6 405 15.13 17.73 10.57 KM Plot
LGG rs34885925 chr10:919032 G/C 1.87E-5 406 15.2 16.38 12.17 KM Plot
LGG rs34913366 chr10:935110 AC/A 1.22E-5 401 15.2 15.73 12.17 KM Plot